Incorporating the NSF/TCPP Curriculum Recommendations in a Liberal Arts Setting

This paper examines the integration of the NSF/TCPP Core Curriculum Recommendations in a liberal arts undergraduate setting. We examine how parallel and distributed computing concepts can be incorporated across the breadth of the undergraduate curriculum. As a model of such an integration, changes are proposed to Data Structures and Design and Analysis of Algorithms. These changes were implemented in Design and Analysis of Algorithms and the results were compared to previous iterations of that course taught by the same instructor. The student feedback received shows that the introduction of these topics made the course more engaging and conveyed an adequate introduction to this material

Distributed Algorithms for Maximizing the Lifetime of Wireless Sensor Networks

Wireless sensor networks (WSNs) are emerging as a key enabling technology for applications domains such as military, homeland security, and environment. However, a major constraint of these sensors is their limited battery. In this dissertation we examine the problem of maximizing the duration of time for which the network meets its coverage objective. Since these networks are very dense, only a subset of sensors need to be in sense or on mode at any given time to meet the coverage objective, while others can go into a power conserving sleep mode. This active set of sensors is known as a cover. The lifetime of the network can be extended by shuffling the cover set over time. In this dissertation, we introduce the concept of a local lifetime dependency graph consisting of the cover sets as nodes with any two nodes connected if the corresponding covers intersect, to capture the interdependencies among the covers. We present heuristics based on some simple properties of this graph and show how they improve over existing algorithms. We also present heuristics based on other properties of this graph, new models for dealing with the solution space and a generalization of our approach to other graph problems

Fault-tolerant Coverage in Dense Wireless Sensor Networks

In this paper, we present methods to detect and recover from sensor failure in dense wireless sensor networks. In order to extend the lifetime of a sensor network while maintaining coverage, a minimal subset of the deployed sensors are kept active while the other sensors can enter a low power sleep state. Several distributed algorithms for coverage have been proposed in the literature. Faults are of particular concern in coverage algorithms since sensors go into a sleep state in order to conserve battery until woken up by active sensors. If these active sensors were to fail, this could lead to lapses in coverage that are unacceptable in critical applications. Also, most algorithms in the literature rely on an active sensor that is about to run out of battery waking up its neighbors to trigger a reshuffle in the network. However, this would not work in the case of unexpected failures since a sensor cannot predict the occurrence of such an event. We present detection and recovery from sensor failure in dense networks. Our algorithms exploit the density in the recovery scheme to improve coverage by 4-12% in the event of random failures. This fault tolerance comes at a small cost to the network lifetime with observed lifetime being reduced by 6-10% in our simulation studies

Positive Influence Dominating Set Generation in Social Networks

Current algorithms in the Positive Influence Dominating Set (PIDS) problem domain are focused on a specific type of PIDS, the Total Positive Influence Dominating Set (TPIDS). We have developed an algorithm specifically targeted towards the non-total type of PIDS. In addition to our new algorithm, we adapted two existing TPIDS algorithms to generate PIDS. We ran simulations for all three algorithms, and our new algorithm consistently generates smaller PIDS than both existing algorithms, with our algorithm generating PIDS approximately 5% smaller than the better of the two existing algorithms

Randomized Algorithms for Approximating a Connected Dominating Set in Wireless Sensor Networks

A Connected Dominating Set (CDS) of a graph representing a Wireless Sensor Network can be used as a virtual backbone for routing through the network. Since the sensors in the network are constrained by limited battery life, we desire a minimal CDS for the network, a known NP-hard problem. In this paper we present three randomized algorithms for constructing a CDS. We evaluate our algorithms using simulations and compare them to the two-hop K2 algorithm and two other greedy algorithms from the literature. After pruning, the randomized algorithms construct a CDS that are generally equivalent in size to those constructed by K2 while being asymptotically better in time and message complexity. This shows the potential of significant energy savings in using a randomized approach as a result of the reduced complexity

A Distributed Greedy Algorithm for Constructing Connected Dominating Sets in Wireless Sensor Networks

A Connected Dominating Set (CDS) of the graph representing a Wireless Sensor Network can be used as a virtual backbone for routing in the network. Since sensor nodes are constrained by limited on-board batteries, it is desirable to have a small CDS for the network. However, constructing a minimum size CDS has been shown to be a NP-hard problem. In this paper we present a distributed greedy algorithm for constructing a CDS that we call Greedy Connect. Our algorithm operates in two phases, first constructing a dominating set and then connecting the nodes in this set. We evaluate our algorithm using simulations and compare it to the two-hop K2 algorithm in the literature. Depending on the network topology, our algorithm generally constructs a CDS that is up to 30% smaller in size than K

NeuronBank: A Tool for Cataloging Neuronal Circuitry

The basic unit of any nervous system is the neuron. Therefore, understanding the operation of nervous systems ultimately requires an inventory of their constituent neurons and synaptic connectivity, which form neural circuits. The presence of uniquely identifiable neurons or classes of neurons in many invertebrates has facilitated the construction of cellular-level connectivity diagrams that can be generalized across individuals within a species. Homologous neurons can also be recognized across species. Here we describe NeuronBank.org, a web-based tool that we are developing for cataloging, searching, and analyzing neuronal circuitry within and across species. Information from a single species is represented in an individual branch of NeuronBank. Users can search within a branch or perform queries across branches to look for similarities in neuronal circuits across species. The branches allow for an extensible ontology so that additional characteristics can be added as knowledge grows. Each entry in NeuronBank generates a unique accession ID, allowing it to be easily cited. There is also an automatic link to a Wiki page allowing an encyclopedic explanation of the entry. All of the 44 previously published neurons plus one previously unpublished neuron from the mollusc, Tritonia diomedea, have been entered into a branch of NeuronBank as have 4 previously published neurons from the mollusc, Melibe leonina. The ability to organize information about neuronal circuits will make this information more accessible, ultimately aiding research on these important models